Analysis of Integrated biomolecular...

Analysis of Integrated biomolecular somethings - CABiNET

Same old slide about integrating networks - different ones, different types, with external kinds of data.

CABiNET - semi-automated network processing pipeline e.g. to identify funcitonal information about proteins.

Identification of sub-structures in the network graphs. Then go thorugh them using biologists. Lots of by-hand triage on the networks.

Uses a manually curated 'alias db' containning db-specific IDs for shared entities.

All seems propperly engineered. J2EE, EJBs, WS, DB, the usual suspects. Nice layered architecture. Seems to have decent through-put. Seems to have a workable web front-end for people. Unfortunately, in our simple during-talk tests, it doesn't work too good.